Online journals are listed alphabetically.
Suggestions for other places to look are at the bottom of the page.

Online Journals that I access often:

A

ACS Journal Archives; individual journals can be accessed one at a time from this gateway, or SEARCHED from one launch page.
American Naturalist (1999-Current), or via JSTOR (1867-1998)
American Journal of Botany via JSTOR (1914-5 years before present)
Analytical Biochemistry (via OhioLink)
Annals of the Missouri Botanical Garden via JSTOR (1914-5 years before present)
Annual Review of Biochemistry (1997-Current)

BC

Biochemistry and Molecular Biology Education (BAMBEd) (2000 and 2001 ONLY, via OhioLink)
BioTechniques Online (full text availability lags a bit behind print publication; full text requires a Free subscription) SEARCH
Biochemical And Biophysical Research Communications (via OhioLink)
Cancer Research (full text available Jan. 1999 to present; free full-text up to...?...) SEARCH
Cell (universal access Jan 1995 to one year before present; most recent year requires $$ subscription) SEARCH
Current Biology (universal access Jan 1994 to one year before present; most recent year requires $$ subscription)
Current opinion in Genetics and Development (via OhioLink)

EFGHI

EMBO Journal Online (free full text 1997-one year before present; ) SEARCH
European Journal of Biochemistry via OhioLink (August 1994-present)
Evolution via JSTOR (1947-3 years before present)
Genes and Development (full text available from October 1997-Current) SEARCH
International Journal of Plant Sciences (1999-Current), or via JSTOR (1875-1998 including previous names: Botanical Gazette and Botanical Bulletin)

JKL

Journal of Bacteriology (abstracts 1992-1997, full text 1998-Current; access to articles from the last few months requires a subscription) SEARCH
Journal of Biology (inaugurated in June 2002, free access online)
Journal of Biological Chemistry (universal access for 1905-one month before present!) SEARCH
Journal of Chemical Education (1995 to present) can be SEARCHED by year and issue or by keywords
Journal of Molecular Biology (via OhioLink; January 1993-present)
Journal of Molecular Evolution (via OhioLink)

M

Molecular Biology and Evolution (1983-present; full text requires $$ subscription) SEARCH (note that this site moved in Jan. 2003)
Molecular and Cellular Biology (full-text Jan. 1995 to present; universal access for all issues not in current calendar year) SEARCH
Mol Gen Genet (via OhioLink)
Molecular Phylogenetics and Evolution (via OhioLink)

NO

Nature (June 1997 to present; full text requires $$ subscription) SEARCH ...or, via EBSCOhost via DU Library (June1997-one year before present)
Nature Genetics (1998-one year before present) via EBSCOhost via DU Library
Nature Medicine (Sep1998-one year before present) via EBSCOhost via DU Library
Nature Methods (October 2004 to present; requires subscription) SEARCH
Nature Structural Biology (July1998-one year before present) via EBSCOhost via DU Library
Nucleic Acids Research (abstracts 1975-1995; full text since 1996; full-text access for Denison) SEARCH

PQR

The Plant Cell (1998-Current)
The Plant Journal (via OhioLink; April 1993-present, but with holes)
Plant Molecular Biology (via OhioLink; Sep 1996-present)
Plant Physiology (1998-present)
PLoS Biology (full text free to all, 2003-present) ARCHIVE
PNAS Online (free full-text access from 1996 to 6 months before present), or via JSTOR (1915-moving wall of 2 years before present) SEARCH PNAS Online
Protein Science (Jan. 1992-present), or via OhioLink (1999 and 2000 only)

STUVWXYZ

Science (October 1995-present; full text requires $$ subscription), or via JSTOR (1880-moving wall of 5 years before present) SEARCH Science Online
Scientific American. SEARCH via EBSCO; restricted to Denison users
South African Journal of Botany via EBSCOhost via DU Library
Taxon (via JSTOR; 1951-3 years before present)
Technical Tips Online
Trends In Biochemical Sciences (via OhioLink)

Other places to look for journals...

Medline, the premier biomolecular science literature database (IMHO)
NCBI's (public-access) PubMed interface to Medline, and the free full-text archive PubMed Central
OhioLINK's interface to Medline, including the ability to find local copies of any article in the database
The best of both worlds: NCBI's Pub Med with live links to OhioLink holdings!
Journal Title Search at CONSORT
Denison University Libraries, including Chemistry-specific resources, CONSORT, and ILL
OhioLink Online Journals
Web of Science -- Science Citation Index via OhioLink
Google Scholar
BioAbstracts via Ohiolink
Scirus, a science-specific search engine that searches both literature databases and the web at large. In my use so far, I've been impressed with how germane the search results are.
JSTOR list of journals
EBSCOhost list of journals
Faculty Of 1000, a user-customizable list of "hot" papers in biomolecular science, hand-picked and rated by a "faculty" of established experts in a variety of subdisciplines. Well worth the subscription cost.
PubCrawler ("it goes to the library, you go to the pub"), an Update Alerting Service for PubMed and GenBank. [my searches]

...and for information on techniques

Open Directory Project's Cell Biology and Biochemistry techniques
A list of Restriction Enzyme recognition sites from Fermentas
Powerpoint lectures on Flow Cytometry and Fluorescence microscopy from Purdue
more info on Flow cytometry from Davidson College

...and for e-texts

The OhioLink Electronic Book Center, including nearly all Springer scholarly titles...


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